PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aan017711
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Artemisia
Family ERF
Protein Properties Length: 227aa    MW: 25732.7 Da    PI: 5.0264
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PUT-183a-Artemisia_annua-119335PU_refplantGDBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-1890141256
        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                 ++GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  Aan017711  90 SFRGVRRRP-WGKFAAEIRDSTR---HgVRVWLGTFDSAEAAAMAYDQAAFSMRGN 141
                59*******.**********422...25*************************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.37E-1989149No hitNo description
Gene3DG3DSA:3.30.730.101.6E-2990149IPR001471AP2/ERF domain
SMARTSM003807.1E-3690154IPR001471AP2/ERF domain
PROSITE profilePS5103222.87990148IPR001471AP2/ERF domain
PfamPF008472.9E-1391140IPR001471AP2/ERF domain
PRINTSPR003679.3E-1091102IPR001471AP2/ERF domain
SuperFamilySSF541716.08E-2291150IPR016177DNA-binding domain
PRINTSPR003679.3E-10114130IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MSNISFEQHF STSDYSPQSQ ESSYSWDELL FHHNSLPFNL NDSEDMLLFD MLATNCETSL  60
PDQSSESNSS TAQIIKEEEV NSEKPMKEKS FRGVRRRPWG KFAAEIRDST RHGVRVWLGT  120
FDSAEAAAMA YDQAAFSMRG NAAVLNFPVE RVKESLQEMK YGLEEGCSPV IALKKRHSMR  180
KKPVSRKNKQ AFSCDNIDKN MVVLEDLGAD YLEQLLSSSE SSATMSW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A6e-2789149161ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A7e-2787149264ATERF1
3gcc_A7e-2787149264ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775978.12e-83PREDICTED: ethylene-responsive transcription factor 1B
RefseqXP_016511764.12e-83PREDICTED: ethylene-responsive transcription factor 1B-like
SwissprotQ8LDC88e-71ERF92_ARATH; Ethylene-responsive transcription factor 1B
TrEMBLD8VD372e-90D8VD37_ACTDE; Ethylene response factor 10
STRINGVIT_07s0005g03230.t013e-81(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.12e-56ethylene response factor 1